Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm12467-201ENSMUST00000117625 745 ntBASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm25288-201ENSMUST00000122800 265 ntBASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm9507-202ENSMUST00000180157 654 ntBASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm27440-201ENSMUST00000184785 107 ntBASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm37629-201ENSMUST00000193635 1050 ntBASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdh19Q80TF3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm23745-201ENSMUST00000104230 125 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm14274-201ENSMUST00000117182 615 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm14113-201ENSMUST00000121399 976 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm24312-201ENSMUST00000178677 119 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm44387-201ENSMUST00000196298 145 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Gm43097-201ENSMUST00000196867 151 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 CT009495.1-201ENSMUST00000224221 862 ntBASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh19Q80TF3 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms