Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.81□□□□□ -0.52
Ift88Q61371 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Cdh18-207ENSMUST00000226693 2165 ntBASIC11.81□□□□□ -0.52
Ift88Q61371 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ift88Q61371 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ift88Q61371 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ift88Q61371 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.8□□□□□ -0.52
Ift88Q61371 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ift88Q61371 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.8□□□□□ -0.52
Ift88Q61371 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ift88Q61371 AC117648.1-201ENSMUST00000219777 2510 ntBASIC11.8□□□□□ -0.52
Ift88Q61371 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.8□□□□□ -0.52
Ift88Q61371 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ift88Q61371 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.8□□□□□ -0.52
Ift88Q61371 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.8□□□□□ -0.52
Ift88Q61371 Gm9369-201ENSMUST00000196009 733 ntBASIC11.8□□□□□ -0.52
Ift88Q61371 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.8□□□□□ -0.52
Ift88Q61371 AC154431.1-201ENSMUST00000224910 880 ntBASIC11.8□□□□□ -0.52
Ift88Q61371 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.8□□□□□ -0.52
Ift88Q61371 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.8□□□□□ -0.52
Ift88Q61371 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ift88Q61371 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ift88Q61371 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ift88Q61371 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.8□□□□□ -0.52
Ift88Q61371 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ift88Q61371 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ift88Q61371 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.8□□□□□ -0.52
Ift88Q61371 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ift88Q61371 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.79□□□□□ -0.52
Ift88Q61371 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ift88Q61371 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ift88Q61371 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.79□□□□□ -0.52
Ift88Q61371 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm11824-201ENSMUST00000120191 846 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 Gm6485-201ENSMUST00000160676 439 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm42780-201ENSMUST00000197083 734 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 AC126459.1-201ENSMUST00000214791 2123 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.79□□□□□ -0.52
Ift88Q61371 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.79□□□□□ -0.52
Ift88Q61371 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ift88Q61371 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ift88Q61371 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ift88Q61371 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms