Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cux1P53564 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cux1P53564 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC16.24■□□□□ 0.19
Cux1P53564 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC16.24■□□□□ 0.19
Cux1P53564 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cux1P53564 Gm44547-201ENSMUST00000207793 1446 ntBASIC16.24■□□□□ 0.19
Cux1P53564 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cux1P53564 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Cux1P53564 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Cux1P53564 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Gm38055-201ENSMUST00000195353 2217 ntBASIC16.24■□□□□ 0.19
Cux1P53564 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC16.24■□□□□ 0.19
Cux1P53564 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cux1P53564 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC16.24■□□□□ 0.19
Cux1P53564 Krtap6-3-201ENSMUST00000079151 444 ntBASIC16.24■□□□□ 0.19
Cux1P53564 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Cux1P53564 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Cux1P53564 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cux1P53564 Gm7790-201ENSMUST00000118716 1310 ntBASIC16.24■□□□□ 0.19
Cux1P53564 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cux1P53564 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Cux1P53564 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 CT009713.3-201ENSMUST00000224987 1565 ntBASIC16.23■□□□□ 0.19
Cux1P53564 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Cux1P53564 Gm3355-201ENSMUST00000160079 487 ntBASIC16.23■□□□□ 0.19
Cux1P53564 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Gm7211-201ENSMUST00000172692 1118 ntBASIC16.23■□□□□ 0.19
Cux1P53564 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cux1P53564 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Gm4812-201ENSMUST00000182847 993 ntBASIC16.23■□□□□ 0.19
Cux1P53564 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cux1P53564 Gm5845-201ENSMUST00000195812 796 ntBASIC16.23■□□□□ 0.19
Cux1P53564 AC164614.1-201ENSMUST00000216038 397 ntBASIC16.23■□□□□ 0.19
Cux1P53564 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC16.23■□□□□ 0.19
Cux1P53564 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cux1P53564 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cux1P53564 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Gm37516-201ENSMUST00000192593 1954 ntBASIC16.22■□□□□ 0.19
Cux1P53564 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC16.22■□□□□ 0.19
Cux1P53564 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC16.22■□□□□ 0.19
Cux1P53564 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Gm24471-201ENSMUST00000104485 131 ntBASIC16.22■□□□□ 0.19
Cux1P53564 Gm12011-201ENSMUST00000119734 618 ntBASIC16.22■□□□□ 0.19
Cux1P53564 Gm14153-201ENSMUST00000119923 1139 ntBASIC16.22■□□□□ 0.19
Cux1P53564 Gm38145-201ENSMUST00000192319 693 ntBASIC16.22■□□□□ 0.19
Cux1P53564 Gm9273-201ENSMUST00000200606 715 ntBASIC16.22■□□□□ 0.19
Cux1P53564 Gm5881-201ENSMUST00000204737 367 ntBASIC16.22■□□□□ 0.19
Cux1P53564 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC16.22■□□□□ 0.19
Cux1P53564 Gm8960-201ENSMUST00000219787 788 ntBASIC16.22■□□□□ 0.19
Cux1P53564 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cux1P53564 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cux1P53564 Gm15604-201ENSMUST00000118350 1456 ntBASIC16.22■□□□□ 0.19
Cux1P53564 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cux1P53564 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cux1P53564 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms