Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.36□□□□□ -0.59
Shmt1P50431 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shmt1P50431 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shmt1P50431 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm12947-201ENSMUST00000116114 420 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Gm25545-201ENSMUST00000122673 323 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm7985-201ENSMUST00000183329 981 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Gm27440-201ENSMUST00000184785 107 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Gm37723-201ENSMUST00000194480 565 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.35□□□□□ -0.59
Shmt1P50431 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Gm26782-203ENSMUST00000227103 751 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.35□□□□□ -0.59
Shmt1P50431 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shmt1P50431 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt1P50431 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Shmt1P50431 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt1P50431 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt1P50431 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Shmt1P50431 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt1P50431 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt1P50431 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.34□□□□□ -0.59
Shmt1P50431 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.34□□□□□ -0.59
Shmt1P50431 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt1P50431 Gm7541-201ENSMUST00000118361 535 ntBASIC11.34□□□□□ -0.59
Shmt1P50431 Gm11475-201ENSMUST00000118482 476 ntBASIC11.34□□□□□ -0.59
Shmt1P50431 Gm12948-201ENSMUST00000119406 682 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms