Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nedd8P29595 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.78□□□□□ -0.84
Nedd8P29595 Gm26448-201ENSMUST00000082446 203 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Rpgrip1-213ENSMUST00000181401 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.78□□□□□ -0.84
Nedd8P29595 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Nedd8P29595 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Nedd8P29595 Fbxw11-202ENSMUST00000093205 3938 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Mc3r-201ENSMUST00000038532 2623 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nedd8P29595 Sf3b2-201ENSMUST00000025774 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Nedd8P29595 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Cald1-203ENSMUST00000115021 4041 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nedd8P29595 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nedd8P29595 Gm38001-201ENSMUST00000192900 3761 ntBASIC9.77□□□□□ -0.84
Nedd8P29595 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nedd8P29595 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC9.77□□□□□ -0.84
Nedd8P29595 Ano1-203ENSMUST00000121758 4552 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nedd8P29595 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.77□□□□□ -0.84
Nedd8P29595 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nedd8P29595 Gm28042-202ENSMUST00000129685 4472 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Hinfp-205ENSMUST00000216508 5333 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Gm42979-201ENSMUST00000196287 2228 ntBASIC9.77□□□□□ -0.85
Nedd8P29595 Gm12218-201ENSMUST00000117666 399 ntBASIC9.77□□□□□ -0.85
Nedd8P29595 Gm11411-201ENSMUST00000117951 719 ntBASIC9.77□□□□□ -0.85
Nedd8P29595 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.77□□□□□ -0.85
Nedd8P29595 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.77□□□□□ -0.85
Nedd8P29595 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nedd8P29595 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.77□□□□□ -0.85
Nedd8P29595 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Gm17825-201ENSMUST00000206836 794 ntBASIC9.77□□□□□ -0.85
Nedd8P29595 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.77□□□□□ -0.85
Nedd8P29595 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC9.77□□□□□ -0.85
Nedd8P29595 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
Nedd8P29595 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nedd8P29595 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Gsdme-203ENSMUST00000165099 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC9.77□□□□□ -0.85
Nedd8P29595 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
Nedd8P29595 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Nedd8P29595 Nrp2-201ENSMUST00000027112 4216 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nedd8P29595 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nedd8P29595 Ankk1-201ENSMUST00000034792 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nedd8P29595 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nedd8P29595 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nedd8P29595 Ufl1-202ENSMUST00000102994 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nedd8P29595 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nedd8P29595 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Nedd8P29595 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nedd8P29595 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nedd8P29595 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nedd8P29595 Zbtb37-205ENSMUST00000171748 2141 ntTSL 5 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms