Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Atf6F6VAN0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm10169-201ENSMUST00000121822 348 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Mir1956-201ENSMUST00000157748 65 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Mir3102-201ENSMUST00000175555 104 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm37641-201ENSMUST00000193837 239 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm38216-201ENSMUST00000194872 1214 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm45594-201ENSMUST00000211717 241 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.05□□□□□ -0.64
Atf6F6VAN0 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atf6F6VAN0 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.04□□□□□ -0.64
Atf6F6VAN0 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm12337-201ENSMUST00000119634 400 ntBASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm13019-201ENSMUST00000120000 276 ntBASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm12899-201ENSMUST00000120565 551 ntBASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm15744-201ENSMUST00000161734 213 ntBASIC11.04□□□□□ -0.64
Atf6F6VAN0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm7880-201ENSMUST00000203748 871 ntBASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.04□□□□□ -0.64
Atf6F6VAN0 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.04□□□□□ -0.64
Atf6F6VAN0 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Atf6F6VAN0 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms