Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Snord55-201ENSMUST00000174939 79 ntBASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Gm37981-201ENSMUST00000194280 535 ntBASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Gm44323-201ENSMUST00000198689 129 ntBASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Gm18730-201ENSMUST00000218038 343 ntBASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Gm5468-202ENSMUST00000227851 682 ntBASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Sftpa1-202ENSMUST00000170719 2854 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd1lQ9CXF7 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm6677-201ENSMUST00000195100 441 ntBASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd1lQ9CXF7 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Gm4784-201ENSMUST00000117365 1824 ntBASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chd1lQ9CXF7 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Gm7851-201ENSMUST00000117574 323 ntBASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Gm13809-201ENSMUST00000117921 597 ntBASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd1lQ9CXF7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms