Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.29□□□□□ -0.44
Trim29Q8R2Q0 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim29Q8R2Q0 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim29Q8R2Q0 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim29Q8R2Q0 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm5244-201ENSMUST00000164001 339 ntBASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm6677-201ENSMUST00000195100 441 ntBASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm42518-201ENSMUST00000196277 938 ntBASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim29Q8R2Q0 Phtf1os-201ENSMUST00000160110 4046 ntBASIC12.27□□□□□ -0.44
Trim29Q8R2Q0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim29Q8R2Q0 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim29Q8R2Q0 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim29Q8R2Q0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim29Q8R2Q0 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim29Q8R2Q0 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim29Q8R2Q0 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim29Q8R2Q0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim29Q8R2Q0 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm11380-201ENSMUST00000118067 560 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm9673-201ENSMUST00000119287 781 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm5529-201ENSMUST00000165691 891 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm20392-201ENSMUST00000173047 701 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.27□□□□□ -0.45
Trim29Q8R2Q0 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim29Q8R2Q0 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms