Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm5764-201ENSMUST00000118817 885 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm11544-201ENSMUST00000120215 382 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm9574-201ENSMUST00000173127 845 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm5881-201ENSMUST00000204737 367 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm18514-201ENSMUST00000218980 436 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm15604-201ENSMUST00000118350 1456 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm6158-201ENSMUST00000109467 904 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm11824-201ENSMUST00000120191 846 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm11980-201ENSMUST00000121445 986 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm22442-201ENSMUST00000157256 144 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm44545-201ENSMUST00000208262 746 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim9Q8C7M3 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms