Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sh3rf2Q8BZT2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm12028-201ENSMUST00000118065 436 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm8152-201ENSMUST00000120842 637 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm25998-201ENSMUST00000175397 53 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm7572-201ENSMUST00000182616 766 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm5254-201ENSMUST00000188353 977 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm38349-201ENSMUST00000195732 462 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm5340-201ENSMUST00000203733 880 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Atf7-201ENSMUST00000096143 390 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sh3rf2Q8BZT2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sh3rf2Q8BZT2 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Sh3rf2Q8BZT2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.9□□□□□ -0.67
Sh3rf2Q8BZT2 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.9□□□□□ -0.67
Sh3rf2Q8BZT2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sh3rf2Q8BZT2 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sh3rf2Q8BZT2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.9□□□□□ -0.67
Sh3rf2Q8BZT2 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm17836-201ENSMUST00000191976 1302 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm23595-201ENSMUST00000104306 130 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm13688-201ENSMUST00000121557 608 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms