Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Smn1P97801 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.16□□□□□ -0.94
Smn1P97801 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Gm45310-201ENSMUST00000210436 275 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Gm18212-201ENSMUST00000211678 889 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Smn1P97801 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Smn1P97801 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.16□□□□□ -0.94
Smn1P97801 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Smn1P97801 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Smn1P97801 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.15□□□□□ -0.94
Smn1P97801 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Smn1P97801 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.15□□□□□ -0.94
Smn1P97801 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
Smn1P97801 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Gm23251-201ENSMUST00000103773 110 ntBASIC9.15□□□□□ -0.94
Smn1P97801 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Smn1P97801 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.15□□□□□ -0.94
Smn1P97801 Gm13422-201ENSMUST00000118834 504 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Gm15554-201ENSMUST00000120406 913 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.15□□□□□ -0.94
Smn1P97801 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Smn1P97801 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm4812-201ENSMUST00000182847 993 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.15□□□□□ -0.94
Smn1P97801 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.15□□□□□ -0.94
Smn1P97801 Gm44155-201ENSMUST00000203923 412 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.15□□□□□ -0.94
Smn1P97801 Mt1-202ENSMUST00000211807 1085 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Smn1P97801 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Gm9899-201ENSMUST00000065519 555 ntBASIC9.15□□□□□ -0.94
Smn1P97801 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Smn1P97801 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smn1P97801 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms