Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Lsm6P62313 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Lsm6P62313 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 AA474408-201ENSMUST00000098110 3339 ntBASIC9.46□□□□□ -0.9
Lsm6P62313 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Lsm6P62313 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lsm6P62313 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm9673-201ENSMUST00000119287 781 ntBASIC9.45□□□□□ -0.9
Lsm6P62313 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm20392-201ENSMUST00000173047 701 ntBASIC9.45□□□□□ -0.9
Lsm6P62313 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.45□□□□□ -0.9
Lsm6P62313 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.45□□□□□ -0.9
Lsm6P62313 Mir8091-201ENSMUST00000183602 139 ntBASIC9.45□□□□□ -0.9
Lsm6P62313 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.45□□□□□ -0.9
Lsm6P62313 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm43097-201ENSMUST00000196867 151 ntBASIC9.45□□□□□ -0.9
Lsm6P62313 Gm44155-201ENSMUST00000203923 412 ntBASIC9.45□□□□□ -0.9
Lsm6P62313 Gm45592-201ENSMUST00000209605 1043 ntBASIC9.45□□□□□ -0.9
Lsm6P62313 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.45□□□□□ -0.9
Lsm6P62313 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Mirlet7i-201ENSMUST00000083472 85 ntBASIC9.45□□□□□ -0.9
Lsm6P62313 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.45□□□□□ -0.9
Lsm6P62313 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Lsm6P62313 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.45□□□□□ -0.9
Lsm6P62313 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lsm6P62313 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.44□□□□□ -0.9
Lsm6P62313 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Lsm6P62313 Gm14270-201ENSMUST00000118388 846 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Gm12337-201ENSMUST00000119634 400 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Gm12791-201ENSMUST00000120788 655 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Lsm6P62313 Gm5529-201ENSMUST00000165691 891 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Gm28388-201ENSMUST00000186262 437 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Gm38313-201ENSMUST00000191953 1266 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Gm42660-201ENSMUST00000197733 947 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm6P62313 Gm45310-201ENSMUST00000210436 275 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Gm45594-201ENSMUST00000211717 241 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms