Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.41□□□□□ -0.9
P04224 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P04224 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P04224 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P04224 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.41□□□□□ -0.9
P04224 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P04224 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
P04224 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P04224 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
P04224 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
P04224 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P04224 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P04224 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P04224 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
P04224 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
P04224 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
P04224 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
P04224 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
P04224 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
P04224 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9.4□□□□□ -0.9
P04224 Gm12247-201ENSMUST00000117585 670 ntBASIC9.4□□□□□ -0.9
P04224 Gm14130-201ENSMUST00000118417 987 ntBASIC9.4□□□□□ -0.9
P04224 Gm8566-201ENSMUST00000120174 465 ntBASIC9.4□□□□□ -0.9
P04224 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.4□□□□□ -0.9
P04224 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Gm25668-201ENSMUST00000157700 129 ntBASIC9.4□□□□□ -0.9
P04224 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Gm17376-201ENSMUST00000166016 84 ntBASIC9.4□□□□□ -0.9
P04224 Olfml3-204ENSMUST00000169286 874 ntBASIC9.4□□□□□ -0.9
P04224 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
P04224 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
P04224 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.4□□□□□ -0.9
P04224 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.4□□□□□ -0.9
P04224 Gm6108-201ENSMUST00000208365 367 ntBASIC9.4□□□□□ -0.9
P04224 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
P04224 Gm6082-201ENSMUST00000215204 454 ntBASIC9.4□□□□□ -0.9
P04224 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.4□□□□□ -0.9
P04224 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.4□□□□□ -0.9
P04224 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.4□□□□□ -0.9
P04224 Gm10288-201ENSMUST00000084614 537 ntBASIC9.4□□□□□ -0.9
P04224 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
P04224 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P04224 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC9.4□□□□□ -0.9
P04224 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.4□□□□□ -0.9
P04224 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC9.4□□□□□ -0.91
P04224 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.4□□□□□ -0.91
P04224 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P04224 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P04224 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P04224 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P04224 Stk11ip-201ENSMUST00000027414 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P04224 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC9.4□□□□□ -0.91
P04224 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC9.4□□□□□ -0.91
P04224 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P04224 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P04224 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P04224 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
P04224 Nrp2-201ENSMUST00000027112 4216 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm38199-201ENSMUST00000192013 3277 ntBASIC9.39□□□□□ -0.91
P04224 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
P04224 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.39□□□□□ -0.91
P04224 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.39□□□□□ -0.91
P04224 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P04224 Gm42941-201ENSMUST00000200347 1321 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms