Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm23251-201ENSMUST00000103773 110 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm13183-201ENSMUST00000118615 789 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Snord55-201ENSMUST00000174939 79 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm8502-201ENSMUST00000185708 901 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm21147-201ENSMUST00000186046 913 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm8510-201ENSMUST00000189202 895 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm2316-201ENSMUST00000190613 921 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm37246-201ENSMUST00000192665 835 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm6677-201ENSMUST00000195100 441 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 AC159246.1-201ENSMUST00000214478 249 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pcdh1F7BJK1 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm11956-201ENSMUST00000119525 512 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm25732-201ENSMUST00000175168 60 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm10774-201ENSMUST00000188689 204 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm43452-201ENSMUST00000201873 991 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm44420-201ENSMUST00000203669 490 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms