Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 DNM1P41-201ENST00000623634 3350 ntBASIC11.96□□□□□ -0.5
TMEM235A6NFC5 AL139158.3-201ENST00000641212 1562 ntBASIC11.96□□□□□ -0.5
TMEM235A6NFC5 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TMEM235A6NFC5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AC244394.1-201ENST00000435000 1665 ntBASIC11.95□□□□□ -0.5
TMEM235A6NFC5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AC005229.1-201ENST00000392885 409 ntBASIC11.95□□□□□ -0.5
TMEM235A6NFC5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AC078819.1-201ENST00000547454 765 ntBASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AC012085.1-201ENST00000548270 765 ntBASIC11.95□□□□□ -0.5
TMEM235A6NFC5 DUX4L46-201ENST00000566845 751 ntBASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TMEM235A6NFC5 OR2I1P-208ENST00000641137 4948 ntBASIC11.94□□□□□ -0.5
TMEM235A6NFC5 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 CHMP1AP1-201ENST00000445563 662 ntBASIC11.94□□□□□ -0.5
TMEM235A6NFC5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 RFPL4AP1-201ENST00000530883 850 ntBASIC11.94□□□□□ -0.5
TMEM235A6NFC5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.94□□□□□ -0.5
TMEM235A6NFC5 AC023511.2-201ENST00000618803 211 ntBASIC11.94□□□□□ -0.5
TMEM235A6NFC5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms