Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm9211-201ENSMUST00000182882 975 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gm27441-201ENSMUST00000185000 105 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gm44329-201ENSMUST00000197469 112 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp4cQ9D7F7 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Chmp4cQ9D7F7 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp4cQ9D7F7 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp4cQ9D7F7 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm14942-201ENSMUST00000119642 336 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm15881-201ENSMUST00000148792 942 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm23771-201ENSMUST00000178702 110 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm43378-201ENSMUST00000199336 582 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm45398-201ENSMUST00000210561 165 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 CT025645.2-201ENSMUST00000223278 3827 ntBASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp4cQ9D7F7 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Gm4917-201ENSMUST00000121452 650 ntBASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Gm28032-201ENSMUST00000184104 96 ntBASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Gm8197-202ENSMUST00000193422 934 ntBASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp4cQ9D7F7 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms