Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm25076-201ENSMUST00000104098 132 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm13045-201ENSMUST00000119019 712 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm3551-201ENSMUST00000190750 664 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm37852-201ENSMUST00000193027 350 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm9555-201ENSMUST00000200908 583 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm45398-201ENSMUST00000210561 165 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkd1Q99MH6 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Gm43084-201ENSMUST00000200696 947 ntBASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Gm19091-201ENSMUST00000208120 978 ntBASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Gm5599-201ENSMUST00000209602 788 ntBASIC10.11□□□□□ -0.79
Nkd1Q99MH6 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkd1Q99MH6 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms