Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Scrt1Q99M85 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm8659-201ENSMUST00000120024 1084 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm15815-201ENSMUST00000120569 255 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 n-R5s130-201ENSMUST00000178128 119 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm24312-201ENSMUST00000178677 119 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 n-R5s106-201ENSMUST00000179060 119 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 n-R5s118-201ENSMUST00000179887 119 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Mir6359-201ENSMUST00000183668 81 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm37207-201ENSMUST00000194284 296 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Wbp1-209ENSMUST00000205023 716 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm18001-201ENSMUST00000212023 688 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.5□□□□□ -0.89
Scrt1Q99M85 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Scrt1Q99M85 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms