Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Mir1190-201ENSMUST00000116925 96 ntBASIC13.3□□□□□ -0.28
RtcbQ99LF4 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Gm3889-201ENSMUST00000212467 612 ntBASIC13.3□□□□□ -0.28
RtcbQ99LF4 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Gm9790-201ENSMUST00000054148 288 ntBASIC13.3□□□□□ -0.28
RtcbQ99LF4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.3□□□□□ -0.28
RtcbQ99LF4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RtcbQ99LF4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.29□□□□□ -0.28
RtcbQ99LF4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm24066-201ENSMUST00000104515 131 ntBASIC13.29□□□□□ -0.28
RtcbQ99LF4 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm17107-201ENSMUST00000170983 553 ntBASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm18391-201ENSMUST00000217189 658 ntBASIC13.29□□□□□ -0.28
RtcbQ99LF4 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.29□□□□□ -0.28
RtcbQ99LF4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RtcbQ99LF4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.28□□□□□ -0.28
RtcbQ99LF4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.28□□□□□ -0.28
RtcbQ99LF4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC13.28□□□□□ -0.28
RtcbQ99LF4 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Gm26379-201ENSMUST00000178125 138 ntBASIC13.28□□□□□ -0.28
RtcbQ99LF4 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 CT025642.1-201ENSMUST00000224734 1219 ntBASIC13.28□□□□□ -0.28
RtcbQ99LF4 Krtap6-3-201ENSMUST00000079151 444 ntBASIC13.28□□□□□ -0.28
RtcbQ99LF4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Gm7190-201ENSMUST00000118669 1452 ntBASIC13.28□□□□□ -0.28
RtcbQ99LF4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms