Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm12176-201ENSMUST00000121420 875 ntBASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm14165-201ENSMUST00000121456 952 ntBASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm43811-201ENSMUST00000202862 695 ntBASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm3619-201ENSMUST00000219947 775 ntBASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim9Q8C7M3 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm15031-201ENSMUST00000121341 210 ntBASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm12208-201ENSMUST00000122004 163 ntBASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm24346-201ENSMUST00000158712 194 ntBASIC11.82□□□□□ -0.52
Trim9Q8C7M3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm9358-201ENSMUST00000183067 927 ntBASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm37365-201ENSMUST00000193109 409 ntBASIC11.82□□□□□ -0.52
Trim9Q8C7M3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim9Q8C7M3 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim9Q8C7M3 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms