Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.83□□□□□ -0.2
Clcn1Q64347 Gm44548-201ENSMUST00000208929 192 ntBASIC13.83□□□□□ -0.2
Clcn1Q64347 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Clcn1Q64347 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Gm17836-201ENSMUST00000191976 1302 ntBASIC13.83□□□□□ -0.2
Clcn1Q64347 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clcn1Q64347 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clcn1Q64347 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clcn1Q64347 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clcn1Q64347 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.82□□□□□ -0.2
Clcn1Q64347 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clcn1Q64347 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.82□□□□□ -0.2
Clcn1Q64347 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC13.82□□□□□ -0.2
Clcn1Q64347 Gm5808-201ENSMUST00000178090 357 ntBASIC13.82□□□□□ -0.2
Clcn1Q64347 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Ighv1-70-201ENSMUST00000196509 351 ntBASIC13.82□□□□□ -0.2
Clcn1Q64347 Gm6352-201ENSMUST00000203583 1134 ntBASIC13.82□□□□□ -0.2
Clcn1Q64347 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Gm45745-201ENSMUST00000211447 1180 ntBASIC13.82□□□□□ -0.2
Clcn1Q64347 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 CT010480.1-201ENSMUST00000223612 363 ntBASIC13.82□□□□□ -0.2
Clcn1Q64347 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clcn1Q64347 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clcn1Q64347 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Gm14592-201ENSMUST00000117201 560 ntBASIC13.81□□□□□ -0.2
Clcn1Q64347 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.81□□□□□ -0.2
Clcn1Q64347 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clcn1Q64347 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.81□□□□□ -0.2
Clcn1Q64347 BX649293.1-201ENSMUST00000227437 631 ntBASIC13.81□□□□□ -0.2
Clcn1Q64347 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms