Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Gm18010-201ENSMUST00000203553 202 ntBASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rc3h1Q4VGL6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm15031-201ENSMUST00000121341 210 ntBASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm16459-201ENSMUST00000121443 686 ntBASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm5656-201ENSMUST00000171020 1096 ntBASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rc3h1Q4VGL6 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rc3h1Q4VGL6 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms