Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trim43aQ3TL54 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.4□□□□□ -0.59
Trim43aQ3TL54 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim43aQ3TL54 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.4□□□□□ -0.59
Trim43aQ3TL54 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim43aQ3TL54 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm11411-201ENSMUST00000117951 719 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Snord55-201ENSMUST00000174939 79 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm44323-201ENSMUST00000198689 129 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm45398-201ENSMUST00000210561 165 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gm23105-201ENSMUST00000083719 134 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim43aQ3TL54 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm22144-201ENSMUST00000157402 102 ntBASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms