Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Smn1P97801 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC9.18□□□□□ -0.94
Smn1P97801 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Smn1P97801 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.17□□□□□ -0.94
Smn1P97801 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smn1P97801 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Smn1P97801 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Smn1P97801 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smn1P97801 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Smn1P97801 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Smn1P97801 Gm14395-201ENSMUST00000120494 563 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.17□□□□□ -0.94
Smn1P97801 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC9.17□□□□□ -0.94
Smn1P97801 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.17□□□□□ -0.94
Smn1P97801 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.17□□□□□ -0.94
Smn1P97801 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smn1P97801 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
Smn1P97801 Gm2260-201ENSMUST00000184965 657 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Gm28450-201ENSMUST00000187349 638 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.17□□□□□ -0.94
Smn1P97801 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.17□□□□□ -0.94
Smn1P97801 Gm44315-201ENSMUST00000203041 219 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Smn1P97801 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smn1P97801 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Smn1P97801 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 AC153498.1-201ENSMUST00000219775 2722 ntBASIC9.17□□□□□ -0.94
Smn1P97801 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Smn1P97801 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.17□□□□□ -0.94
Smn1P97801 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smn1P97801 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC9.16□□□□□ -0.94
Smn1P97801 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Gm14277-201ENSMUST00000121195 360 ntBASIC9.16□□□□□ -0.94
Smn1P97801 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smn1P97801 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms