Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Gm4775-201ENSMUST00000169588 402 ntBASIC13.52□□□□□ -0.25
Nkx2-3P97334 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Gm8022-201ENSMUST00000191763 904 ntBASIC13.52□□□□□ -0.25
Nkx2-3P97334 BB187690-201ENSMUST00000198619 1176 ntBASIC13.52□□□□□ -0.25
Nkx2-3P97334 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Gm2716-201ENSMUST00000212350 643 ntBASIC13.52□□□□□ -0.25
Nkx2-3P97334 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx2-3P97334 AC165092.1-201ENSMUST00000224018 486 ntBASIC13.52□□□□□ -0.25
Nkx2-3P97334 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Nkx2-3P97334 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC13.52□□□□□ -0.25
Nkx2-3P97334 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx2-3P97334 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Gm17107-201ENSMUST00000170983 553 ntBASIC13.51□□□□□ -0.25
Nkx2-3P97334 Mir7088-201ENSMUST00000184227 86 ntBASIC13.51□□□□□ -0.25
Nkx2-3P97334 Gm27441-201ENSMUST00000185000 105 ntBASIC13.51□□□□□ -0.25
Nkx2-3P97334 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC13.51□□□□□ -0.25
Nkx2-3P97334 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.51□□□□□ -0.25
Nkx2-3P97334 Gm5424-201ENSMUST00000053865 1240 ntBASIC13.51□□□□□ -0.25
Nkx2-3P97334 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx2-3P97334 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-3P97334 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm45663-201ENSMUST00000210429 1632 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 AC137950.2-202ENSMUST00000227150 1635 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-3P97334 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm42449-201ENSMUST00000200349 2258 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm11411-201ENSMUST00000117951 719 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm15032-201ENSMUST00000118547 411 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm15636-201ENSMUST00000119205 668 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm6276-201ENSMUST00000120159 579 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm6216-201ENSMUST00000182390 687 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm6644-201ENSMUST00000186507 951 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms