Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm12859-201ENSMUST00000117834 427 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm11783-201ENSMUST00000119549 885 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm10807-201ENSMUST00000177134 795 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm4310-201ENSMUST00000177847 889 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm8343-201ENSMUST00000182705 994 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm37852-201ENSMUST00000193027 350 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 AC166344.1-202ENSMUST00000224139 234 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm42633-201ENSMUST00000198853 2764 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm9978-201ENSMUST00000069431 3273 ntBASIC8.32□□□□□ -1.08
Ctdsp1P58466 Lonp2-203ENSMUST00000122188 2372 ntTSL 2 BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Aplf-202ENSMUST00000065997 3132 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ctdsp1P58466 Stard13-208ENSMUST00000202111 3373 ntTSL 5 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm37731-201ENSMUST00000194545 2237 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm12097-201ENSMUST00000121523 1414 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm43817-201ENSMUST00000196459 2262 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm43615-201ENSMUST00000197465 1773 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 AC168276.1-201ENSMUST00000218963 2385 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm16379-201ENSMUST00000161469 348 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm8502-201ENSMUST00000185708 901 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm21147-201ENSMUST00000186046 913 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm8510-201ENSMUST00000189202 895 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm2316-201ENSMUST00000190613 921 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm8762-201ENSMUST00000193486 339 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm45668-201ENSMUST00000211271 493 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 AC159006.1-201ENSMUST00000226396 258 ntBASIC8.31□□□□□ -1.08
Ctdsp1P58466 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Ctdsp1P58466 9030619P08Rik-201ENSMUST00000096397 857 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms