Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Atxn1P54254 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Atxn1P54254 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Atxn1P54254 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Atxn1P54254 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Atxn1P54254 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Atxn1P54254 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Atxn1P54254 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.77□□□□□ -0.68
Atxn1P54254 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Atxn1P54254 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Atxn1P54254 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Atxn1P54254 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Atxn1P54254 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.68
Atxn1P54254 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Atxn1P54254 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Atxn1P54254 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.77□□□□□ -0.69
Atxn1P54254 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Atxn1P54254 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Atxn1P54254 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.77□□□□□ -0.69
Atxn1P54254 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.77□□□□□ -0.69
Atxn1P54254 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.77□□□□□ -0.69
Atxn1P54254 Gm7445-201ENSMUST00000192115 340 ntBASIC10.77□□□□□ -0.69
Atxn1P54254 Gm37688-201ENSMUST00000195195 465 ntBASIC10.77□□□□□ -0.69
Atxn1P54254 Gm42687-201ENSMUST00000199075 164 ntBASIC10.77□□□□□ -0.69
Atxn1P54254 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC10.77□□□□□ -0.69
Atxn1P54254 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.77□□□□□ -0.69
Atxn1P54254 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.77□□□□□ -0.69
Atxn1P54254 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Atxn1P54254 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Atxn1P54254 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.77□□□□□ -0.69
Atxn1P54254 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Atxn1P54254 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Atxn1P54254 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Atxn1P54254 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.76□□□□□ -0.69
Atxn1P54254 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Gm25148-201ENSMUST00000104611 123 ntBASIC10.76□□□□□ -0.69
Atxn1P54254 Gm12947-201ENSMUST00000116114 420 ntBASIC10.76□□□□□ -0.69
Atxn1P54254 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC10.76□□□□□ -0.69
Atxn1P54254 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Gm6291-201ENSMUST00000179994 309 ntBASIC10.76□□□□□ -0.69
Atxn1P54254 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.76□□□□□ -0.69
Atxn1P54254 BB187690-201ENSMUST00000198619 1176 ntBASIC10.76□□□□□ -0.69
Atxn1P54254 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Gm44640-201ENSMUST00000206894 247 ntBASIC10.76□□□□□ -0.69
Atxn1P54254 Gm29689-201ENSMUST00000221076 589 ntBASIC10.76□□□□□ -0.69
Atxn1P54254 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.76□□□□□ -0.69
Atxn1P54254 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms