Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm29300-201ENSMUST00000190738 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm20793-201ENSMUST00000190779 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm28879-201ENSMUST00000190973 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21752-201ENSMUST00000191023 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm28841-201ENSMUST00000191284 695 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21813-201ENSMUST00000191291 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21878-201ENSMUST00000191365 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21855-201ENSMUST00000191596 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm20833-201ENSMUST00000192708 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21907-201ENSMUST00000192989 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm20928-201ENSMUST00000192992 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm20851-201ENSMUST00000193038 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm37476-201ENSMUST00000193046 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21678-201ENSMUST00000193567 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21768-201ENSMUST00000194103 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm20836-201ENSMUST00000194582 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21660-201ENSMUST00000195789 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm44388-201ENSMUST00000204350 258 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm35412-201ENSMUST00000220437 999 ntBASIC11.08□□□□□ -0.64
Sox1P53783 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC11.08□□□□□ -0.64
Sox1P53783 AC156561.1-201ENSMUST00000224774 233 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm28653-202ENSMUST00000227082 521 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox1P53783 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox1P53783 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sox1P53783 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Sox1P53783 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Gm8806-201ENSMUST00000120076 1407 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sox1P53783 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sox1P53783 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox1P53783 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sox1P53783 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Sox1P53783 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sox1P53783 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.07□□□□□ -0.64
Sox1P53783 Snord17-201ENSMUST00000104526 238 ntBASIC11.07□□□□□ -0.64
Sox1P53783 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sox1P53783 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Sox1P53783 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox1P53783 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox1P53783 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC11.07□□□□□ -0.64
Sox1P53783 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox1P53783 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sox1P53783 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox1P53783 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC11.07□□□□□ -0.64
Sox1P53783 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.07□□□□□ -0.64
Sox1P53783 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox1P53783 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 AC141884.2-201ENSMUST00000228811 775 ntBASIC11.07□□□□□ -0.64
Sox1P53783 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox1P53783 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox1P53783 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Sox1P53783 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Sox1P53783 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox1P53783 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.07□□□□□ -0.64
Sox1P53783 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox1P53783 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sox1P53783 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sox1P53783 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms