Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC167234.1-201ENSMUST00000219929 279 ntBASIC15.82■□□□□ 0.12
Chd1P40201 AC068459.1-201ENSMUST00000222492 905 ntTSL 3 BASIC15.82■□□□□ 0.12
Chd1P40201 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Chd1P40201 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd1P40201 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd1P40201 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC15.82■□□□□ 0.12
Chd1P40201 Gm19178-201ENSMUST00000217524 1819 ntBASIC15.82■□□□□ 0.12
Chd1P40201 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd1P40201 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd1P40201 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chd1P40201 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Chd1P40201 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd1P40201 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Gm43340-201ENSMUST00000200448 1344 ntBASIC15.81■□□□□ 0.12
Chd1P40201 Gm32255-201ENSMUST00000219456 1349 ntBASIC15.81■□□□□ 0.12
Chd1P40201 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Gm20501-202ENSMUST00000211303 2194 ntBASIC15.81■□□□□ 0.12
Chd1P40201 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Chd1P40201 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Rspo4os-201ENSMUST00000152229 1281 ntTSL 5 BASIC15.81■□□□□ 0.12
Chd1P40201 Tac1-205ENSMUST00000185187 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Gm8388-201ENSMUST00000193000 756 ntBASIC15.81■□□□□ 0.12
Chd1P40201 Gm44978-201ENSMUST00000206635 317 ntBASIC15.81■□□□□ 0.12
Chd1P40201 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Rgs9-204ENSMUST00000106706 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Gm5310-201ENSMUST00000197861 1511 ntBASIC15.81■□□□□ 0.12
Chd1P40201 AC140209.1-203ENSMUST00000227412 1524 ntBASIC15.81■□□□□ 0.12
Chd1P40201 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Zfp819-202ENSMUST00000116324 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd1P40201 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chd1P40201 Ptprm-203ENSMUST00000224091 3773 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd1P40201 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Ccl19-201ENSMUST00000102957 745 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Apex2-202ENSMUST00000112719 969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Gm11225-201ENSMUST00000118903 1049 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Rpl19-ps11-201ENSMUST00000122422 591 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd1P40201 Gm28922-201ENSMUST00000189785 308 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC15.8■□□□□ 0.12
Chd1P40201 Gm32858-201ENSMUST00000205246 585 ntBASIC15.8■□□□□ 0.12
Chd1P40201 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 AC165159.1-201ENSMUST00000223825 631 ntBASIC15.8■□□□□ 0.12
Chd1P40201 AC154548.2-201ENSMUST00000224621 469 ntBASIC15.8■□□□□ 0.12
Chd1P40201 AC140244.1-201ENSMUST00000228454 229 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Gm43290-201ENSMUST00000200359 1557 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chd1P40201 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chd1P40201 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Gm37036-201ENSMUST00000192836 2506 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Tmigd1-201ENSMUST00000072633 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd1P40201 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Gpcpd1-201ENSMUST00000028822 3179 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd1P40201 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC15.8■□□□□ 0.12
Chd1P40201 Tmem89-202ENSMUST00000192852 945 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Gm7319-201ENSMUST00000210047 778 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Gm2253-201ENSMUST00000211775 414 ntBASIC15.8■□□□□ 0.12
Chd1P40201 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chd1P40201 Cryaa-206ENSMUST00000228716 1117 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chd1P40201 Ctsw-201ENSMUST00000025844 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd1P40201 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1P40201 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1P40201 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1P40201 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC15.79■□□□□ 0.12
Chd1P40201 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chd1P40201 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chd1P40201 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1P40201 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1P40201 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Chd1P40201 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1P40201 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd1P40201 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chd1P40201 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms