Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6aP27664 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Pde6aP27664 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.47□□□□□ -0.41
Pde6aP27664 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.47□□□□□ -0.41
Pde6aP27664 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.47□□□□□ -0.41
Pde6aP27664 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Pde6aP27664 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Pde6aP27664 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.47□□□□□ -0.41
Pde6aP27664 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pde6aP27664 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Gm16288-201ENSMUST00000137940 367 ntBASIC12.47□□□□□ -0.41
Pde6aP27664 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.47□□□□□ -0.41
Pde6aP27664 Mir6958-201ENSMUST00000184207 73 ntBASIC12.47□□□□□ -0.41
Pde6aP27664 Gm44498-201ENSMUST00000199509 111 ntBASIC12.47□□□□□ -0.41
Pde6aP27664 Gm5298-201ENSMUST00000201122 892 ntBASIC12.47□□□□□ -0.41
Pde6aP27664 Gm31941-201ENSMUST00000209689 350 ntBASIC12.47□□□□□ -0.41
Pde6aP27664 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pde6aP27664 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.47□□□□□ -0.41
Pde6aP27664 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pde6aP27664 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6aP27664 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6aP27664 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pde6aP27664 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pde6aP27664 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pde6aP27664 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6aP27664 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Gm11919-201ENSMUST00000117609 721 ntBASIC12.46□□□□□ -0.41
Pde6aP27664 Gm14213-201ENSMUST00000119778 768 ntBASIC12.46□□□□□ -0.41
Pde6aP27664 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Gm11980-201ENSMUST00000121445 986 ntBASIC12.46□□□□□ -0.41
Pde6aP27664 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6aP27664 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Pde6aP27664 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.46□□□□□ -0.41
Pde6aP27664 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Gm5801-201ENSMUST00000182247 780 ntBASIC12.46□□□□□ -0.41
Pde6aP27664 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.46□□□□□ -0.41
Pde6aP27664 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.46□□□□□ -0.41
Pde6aP27664 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pde6aP27664 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pde6aP27664 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pde6aP27664 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6aP27664 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Pde6aP27664 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6aP27664 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6aP27664 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6aP27664 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6aP27664 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6aP27664 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6aP27664 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.46□□□□□ -0.42
Pde6aP27664 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pde6aP27664 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms