Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC12.49□□□□□ -0.41
Col1a1P11087 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.49□□□□□ -0.41
Col1a1P11087 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC12.49□□□□□ -0.41
Col1a1P11087 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col1a1P11087 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col1a1P11087 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Col1a1P11087 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.48□□□□□ -0.41
Col1a1P11087 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.48□□□□□ -0.41
Col1a1P11087 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col1a1P11087 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC12.48□□□□□ -0.41
Col1a1P11087 n-R5s154-201ENSMUST00000122513 108 ntBASIC12.48□□□□□ -0.41
Col1a1P11087 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC12.48□□□□□ -0.41
Col1a1P11087 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC12.48□□□□□ -0.41
Col1a1P11087 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC12.48□□□□□ -0.41
Col1a1P11087 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC12.48□□□□□ -0.41
Col1a1P11087 Gm42908-201ENSMUST00000197508 870 ntBASIC12.48□□□□□ -0.41
Col1a1P11087 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col1a1P11087 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC12.48□□□□□ -0.41
Col1a1P11087 AC151971.6-201ENSMUST00000216193 866 ntBASIC12.48□□□□□ -0.41
Col1a1P11087 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col1a1P11087 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col1a1P11087 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col1a1P11087 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Gm14853-201ENSMUST00000116081 549 ntBASIC12.47□□□□□ -0.41
Col1a1P11087 Gm8754-201ENSMUST00000118391 520 ntBASIC12.47□□□□□ -0.41
Col1a1P11087 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC12.47□□□□□ -0.41
Col1a1P11087 Gm44716-201ENSMUST00000209007 710 ntBASIC12.47□□□□□ -0.41
Col1a1P11087 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC12.47□□□□□ -0.41
Col1a1P11087 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC12.47□□□□□ -0.41
Col1a1P11087 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC12.47□□□□□ -0.41
Col1a1P11087 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col1a1P11087 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Gm17541-201ENSMUST00000080062 525 ntBASIC12.47□□□□□ -0.41
Col1a1P11087 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.47□□□□□ -0.41
Col1a1P11087 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Col1a1P11087 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.47□□□□□ -0.41
Col1a1P11087 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col1a1P11087 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col1a1P11087 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms