Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm12362-201ENSMUST00000121986 342 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm24352-201ENSMUST00000158966 125 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm38309-201ENSMUST00000192063 1518 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm29803-201ENSMUST00000205069 375 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 AC100406.1-201ENSMUST00000217305 480 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm5191-201ENSMUST00000222882 1236 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 CT009713.3-201ENSMUST00000224987 1565 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 AC129590.1-201ENSMUST00000225573 852 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 AC124555.1-201ENSMUST00000227051 880 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 n-R5s25-201ENSMUST00000082923 119 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm6378-201ENSMUST00000084199 444 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col4a6B1AVK5 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm31763-202ENSMUST00000218205 1724 ntBASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm38246-201ENSMUST00000194318 1511 ntBASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm14111-201ENSMUST00000119851 999 ntBASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm4996-201ENSMUST00000122042 784 ntBASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm43833-201ENSMUST00000198828 293 ntBASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm8055-201ENSMUST00000099956 1008 ntBASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col4a6B1AVK5 Gm7847-201ENSMUST00000151645 777 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Gm6463-201ENSMUST00000182090 966 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Ighv1-8-201ENSMUST00000192236 293 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Gm43103-201ENSMUST00000199021 802 ntBASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col4a6B1AVK5 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms