Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.73■■□□□ 1.07
Nr1h3Q9Z0Y9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Smad6-203ENSMUST00000179458 273 ntBASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Gm40848-201ENSMUST00000221998 324 ntBASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Nr1h3Q9Z0Y9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1h3Q9Z0Y9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1h3Q9Z0Y9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.71■■□□□ 1.07
Nr1h3Q9Z0Y9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.71■■□□□ 1.07
Nr1h3Q9Z0Y9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.71■■□□□ 1.07
Nr1h3Q9Z0Y9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Nr1h3Q9Z0Y9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nr1h3Q9Z0Y9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Nr1h3Q9Z0Y9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr1h3Q9Z0Y9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr1h3Q9Z0Y9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nr1h3Q9Z0Y9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
Nr1h3Q9Z0Y9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nr1h3Q9Z0Y9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Nr1h3Q9Z0Y9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nr1h3Q9Z0Y9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nr1h3Q9Z0Y9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nr1h3Q9Z0Y9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.68■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.68■■□□□ 1.06
Nr1h3Q9Z0Y9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Nr1h3Q9Z0Y9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nr1h3Q9Z0Y9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.68■■□□□ 1.06
Nr1h3Q9Z0Y9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nr1h3Q9Z0Y9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm7291-201ENSMUST00000199147 382 ntBASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm42642-201ENSMUST00000200683 355 ntBASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nr1h3Q9Z0Y9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nr1h3Q9Z0Y9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nr1h3Q9Z0Y9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.66■■□□□ 1.06
Nr1h3Q9Z0Y9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Nr1h3Q9Z0Y9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nr1h3Q9Z0Y9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.66■■□□□ 1.06
Nr1h3Q9Z0Y9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Nr1h3Q9Z0Y9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Gm42569-201ENSMUST00000200539 472 ntBASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nr1h3Q9Z0Y9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nr1h3Q9Z0Y9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.64■■□□□ 1.05
Nr1h3Q9Z0Y9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.64■■□□□ 1.05
Nr1h3Q9Z0Y9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nr1h3Q9Z0Y9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Nr1h3Q9Z0Y9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nr1h3Q9Z0Y9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.64■■□□□ 1.05
Nr1h3Q9Z0Y9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms