Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 Gm45102-201ENSMUST00000207427 857 ntBASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Rps24-207ENSMUST00000224568 714 ntBASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn9Q9Z0S7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn9Q9Z0S7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Notumos-201ENSMUST00000151998 2659 ntBASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Gm14117-201ENSMUST00000122417 843 ntBASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cldn9Q9Z0S7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Mir6236-201ENSMUST00000184437 123 ntBASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cldn9Q9Z0S7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cldn9Q9Z0S7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cldn9Q9Z0S7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms