Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cx3cr1Q9Z0D9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cr1Q9Z0D9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cr1Q9Z0D9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cr1Q9Z0D9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cr1Q9Z0D9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.92■□□□□ 0.3
Cx3cr1Q9Z0D9 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.92■□□□□ 0.3
Cx3cr1Q9Z0D9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.92■□□□□ 0.3
Cx3cr1Q9Z0D9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cx3cr1Q9Z0D9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cx3cr1Q9Z0D9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.91■□□□□ 0.3
Cx3cr1Q9Z0D9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cx3cr1Q9Z0D9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cx3cr1Q9Z0D9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cx3cr1Q9Z0D9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cx3cr1Q9Z0D9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cx3cr1Q9Z0D9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cx3cr1Q9Z0D9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cx3cr1Q9Z0D9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cx3cr1Q9Z0D9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cx3cr1Q9Z0D9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cx3cr1Q9Z0D9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cx3cr1Q9Z0D9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cx3cr1Q9Z0D9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cx3cr1Q9Z0D9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cx3cr1Q9Z0D9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cx3cr1Q9Z0D9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cx3cr1Q9Z0D9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cx3cr1Q9Z0D9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cx3cr1Q9Z0D9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cx3cr1Q9Z0D9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cx3cr1Q9Z0D9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.86■□□□□ 0.29
Cx3cr1Q9Z0D9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cx3cr1Q9Z0D9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cx3cr1Q9Z0D9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cx3cr1Q9Z0D9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cx3cr1Q9Z0D9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cx3cr1Q9Z0D9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cx3cr1Q9Z0D9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Gm10420-201ENSMUST00000121713 882 ntBASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cx3cr1Q9Z0D9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms