Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccr9Q9WUT7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccr9Q9WUT7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccr9Q9WUT7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccr9Q9WUT7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccr9Q9WUT7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccr9Q9WUT7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ccr9Q9WUT7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccr9Q9WUT7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccr9Q9WUT7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccr9Q9WUT7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccr9Q9WUT7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccr9Q9WUT7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccr9Q9WUT7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccr9Q9WUT7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccr9Q9WUT7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.34■□□□□ 0.37
Ccr9Q9WUT7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.34■□□□□ 0.37
Ccr9Q9WUT7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.34■□□□□ 0.37
Ccr9Q9WUT7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccr9Q9WUT7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccr9Q9WUT7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccr9Q9WUT7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.33■□□□□ 0.37
Ccr9Q9WUT7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccr9Q9WUT7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccr9Q9WUT7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccr9Q9WUT7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.31■□□□□ 0.36
Ccr9Q9WUT7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccr9Q9WUT7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccr9Q9WUT7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccr9Q9WUT7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccr9Q9WUT7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccr9Q9WUT7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccr9Q9WUT7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccr9Q9WUT7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms