Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RpgrQ9R0X5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
RpgrQ9R0X5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RpgrQ9R0X5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RpgrQ9R0X5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.16■□□□□ 0.82
RpgrQ9R0X5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RpgrQ9R0X5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RpgrQ9R0X5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RpgrQ9R0X5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
RpgrQ9R0X5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RpgrQ9R0X5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RpgrQ9R0X5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RpgrQ9R0X5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RpgrQ9R0X5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RpgrQ9R0X5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RpgrQ9R0X5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RpgrQ9R0X5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RpgrQ9R0X5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RpgrQ9R0X5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RpgrQ9R0X5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RpgrQ9R0X5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RpgrQ9R0X5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RpgrQ9R0X5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RpgrQ9R0X5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.12■□□□□ 0.81
RpgrQ9R0X5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RpgrQ9R0X5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
RpgrQ9R0X5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RpgrQ9R0X5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RpgrQ9R0X5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RpgrQ9R0X5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RpgrQ9R0X5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RpgrQ9R0X5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RpgrQ9R0X5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RpgrQ9R0X5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RpgrQ9R0X5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.09■□□□□ 0.81
RpgrQ9R0X5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RpgrQ9R0X5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
RpgrQ9R0X5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RpgrQ9R0X5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RpgrQ9R0X5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RpgrQ9R0X5 Gm22238-201ENSMUST00000175222 88 ntBASIC20.08■□□□□ 0.81
RpgrQ9R0X5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RpgrQ9R0X5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RpgrQ9R0X5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RpgrQ9R0X5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RpgrQ9R0X5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.07■□□□□ 0.8
RpgrQ9R0X5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
RpgrQ9R0X5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RpgrQ9R0X5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RpgrQ9R0X5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.07■□□□□ 0.8
RpgrQ9R0X5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RpgrQ9R0X5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RpgrQ9R0X5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RpgrQ9R0X5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RpgrQ9R0X5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RpgrQ9R0X5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms