Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Clcn2Q9R0A1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn2Q9R0A1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.44■□□□□ 0.86
Clcn2Q9R0A1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.44■□□□□ 0.86
Clcn2Q9R0A1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn2Q9R0A1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn2Q9R0A1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn2Q9R0A1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn2Q9R0A1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn2Q9R0A1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcn2Q9R0A1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.43■□□□□ 0.86
Clcn2Q9R0A1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.43■□□□□ 0.86
Clcn2Q9R0A1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn2Q9R0A1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.43■□□□□ 0.86
Clcn2Q9R0A1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcn2Q9R0A1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn2Q9R0A1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn2Q9R0A1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.42■□□□□ 0.86
Clcn2Q9R0A1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn2Q9R0A1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn2Q9R0A1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcn2Q9R0A1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcn2Q9R0A1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Gm22238-201ENSMUST00000175222 88 ntBASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Clcn2Q9R0A1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Clcn2Q9R0A1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn2Q9R0A1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcn2Q9R0A1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn2Q9R0A1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clcn2Q9R0A1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Clcn2Q9R0A1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.39■□□□□ 0.85
Clcn2Q9R0A1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn2Q9R0A1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn2Q9R0A1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn2Q9R0A1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn2Q9R0A1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn2Q9R0A1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn2Q9R0A1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn2Q9R0A1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn2Q9R0A1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn2Q9R0A1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn2Q9R0A1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn2Q9R0A1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn2Q9R0A1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn2Q9R0A1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Clcn2Q9R0A1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn2Q9R0A1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn2Q9R0A1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Clcn2Q9R0A1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms