Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nubp1Q9R060 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.4■□□□□ 0.38
Nubp1Q9R060 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Notumos-201ENSMUST00000151998 2659 ntBASIC17.4■□□□□ 0.38
Nubp1Q9R060 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nubp1Q9R060 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nubp1Q9R060 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.39■□□□□ 0.37
Nubp1Q9R060 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nubp1Q9R060 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nubp1Q9R060 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nubp1Q9R060 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.38■□□□□ 0.37
Nubp1Q9R060 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.38■□□□□ 0.37
Nubp1Q9R060 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.38■□□□□ 0.37
Nubp1Q9R060 Nespas-201ENSMUST00000143738 1083 ntBASIC17.37■□□□□ 0.37
Nubp1Q9R060 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Nubp1Q9R060 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nubp1Q9R060 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nubp1Q9R060 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.37■□□□□ 0.37
Nubp1Q9R060 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nubp1Q9R060 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Nubp1Q9R060 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nubp1Q9R060 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Gm11421-201ENSMUST00000122124 294 ntBASIC17.36■□□□□ 0.37
Nubp1Q9R060 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.36■□□□□ 0.37
Nubp1Q9R060 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nubp1Q9R060 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.35■□□□□ 0.37
Nubp1Q9R060 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.35■□□□□ 0.37
Nubp1Q9R060 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nubp1Q9R060 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nubp1Q9R060 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nubp1Q9R060 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.34■□□□□ 0.37
Nubp1Q9R060 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.34■□□□□ 0.37
Nubp1Q9R060 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.34■□□□□ 0.37
Nubp1Q9R060 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nubp1Q9R060 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nubp1Q9R060 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nubp1Q9R060 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nubp1Q9R060 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Nubp1Q9R060 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
Nubp1Q9R060 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nubp1Q9R060 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms