Protein–RNA interactions for Protein: Q9JLR9

Higd1a, HIG1 domain family member 1A, mitochondrial, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Higd1aQ9JLR9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Higd1aQ9JLR9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Higd1aQ9JLR9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Higd1aQ9JLR9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Higd1aQ9JLR9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.27□□□□□ -0.12
Higd1aQ9JLR9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Higd1aQ9JLR9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Higd1aQ9JLR9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Higd1aQ9JLR9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Gm9806-201ENSMUST00000051080 552 ntBASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Higd1aQ9JLR9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Higd1aQ9JLR9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.24□□□□□ -0.13
Higd1aQ9JLR9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Higd1aQ9JLR9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.24□□□□□ -0.13
Higd1aQ9JLR9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Scarna2-201ENSMUST00000157560 414 ntBASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Gm16437-201ENSMUST00000025669 507 ntBASIC14.23□□□□□ -0.13
Higd1aQ9JLR9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms