Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.36■□□□□ 0.21
Ssna1Q9JJ94 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssna1Q9JJ94 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssna1Q9JJ94 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssna1Q9JJ94 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssna1Q9JJ94 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssna1Q9JJ94 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssna1Q9JJ94 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ssna1Q9JJ94 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ssna1Q9JJ94 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssna1Q9JJ94 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssna1Q9JJ94 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssna1Q9JJ94 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssna1Q9JJ94 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ssna1Q9JJ94 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssna1Q9JJ94 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssna1Q9JJ94 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssna1Q9JJ94 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssna1Q9JJ94 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssna1Q9JJ94 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssna1Q9JJ94 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssna1Q9JJ94 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssna1Q9JJ94 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms