Protein–RNA interactions for Protein: Q9JHL1

Slc9a3r2, Na(+)/H(+) exchange regulatory cofactor NHE-RF2, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r2Q9JHL1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r2Q9JHL1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r2Q9JHL1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r2Q9JHL1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r2Q9JHL1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r2Q9JHL1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Slc9a3r2Q9JHL1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Slc9a3r2Q9JHL1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.11■□□□□ 0.49
Slc9a3r2Q9JHL1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Slc9a3r2Q9JHL1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r2Q9JHL1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r2Q9JHL1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r2Q9JHL1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r2Q9JHL1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc9a3r2Q9JHL1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.11■□□□□ 0.49
Slc9a3r2Q9JHL1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.1■□□□□ 0.49
Slc9a3r2Q9JHL1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.1■□□□□ 0.49
Slc9a3r2Q9JHL1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Slc9a3r2Q9JHL1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r2Q9JHL1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r2Q9JHL1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc9a3r2Q9JHL1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Slc9a3r2Q9JHL1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Slc9a3r2Q9JHL1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc9a3r2Q9JHL1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc9a3r2Q9JHL1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc9a3r2Q9JHL1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc9a3r2Q9JHL1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r2Q9JHL1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r2Q9JHL1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc9a3r2Q9JHL1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r2Q9JHL1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r2Q9JHL1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc9a3r2Q9JHL1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r2Q9JHL1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r2Q9JHL1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc9a3r2Q9JHL1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r2Q9JHL1 Golph3-202ENSMUST00000226517 2359 ntBASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Gm40881-201ENSMUST00000223397 166 ntBASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r2Q9JHL1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r2Q9JHL1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r2Q9JHL1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r2Q9JHL1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms