Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rtn3Q9ES97 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn3Q9ES97 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.29■■□□□ 1
Rtn3Q9ES97 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn3Q9ES97 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn3Q9ES97 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.29■■□□□ 1
Rtn3Q9ES97 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rtn3Q9ES97 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rtn3Q9ES97 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn3Q9ES97 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.28■■□□□ 1
Rtn3Q9ES97 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn3Q9ES97 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn3Q9ES97 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rtn3Q9ES97 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Rtn3Q9ES97 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.27■■□□□ 1
Rtn3Q9ES97 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.27■■□□□ 1
Rtn3Q9ES97 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn3Q9ES97 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rtn3Q9ES97 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn3Q9ES97 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rtn3Q9ES97 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn3Q9ES97 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn3Q9ES97 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn3Q9ES97 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.25■□□□□ 0.99
Rtn3Q9ES97 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.25■□□□□ 0.99
Rtn3Q9ES97 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn3Q9ES97 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.25■□□□□ 0.99
Rtn3Q9ES97 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn3Q9ES97 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn3Q9ES97 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.25■□□□□ 0.99
Rtn3Q9ES97 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn3Q9ES97 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.23■□□□□ 0.99
Rtn3Q9ES97 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn3Q9ES97 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn3Q9ES97 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn3Q9ES97 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn3Q9ES97 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn3Q9ES97 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn3Q9ES97 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rtn3Q9ES97 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Rtn3Q9ES97 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn3Q9ES97 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn3Q9ES97 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rtn3Q9ES97 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtn3Q9ES97 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rtn3Q9ES97 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rtn3Q9ES97 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn3Q9ES97 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.2■□□□□ 0.98
Rtn3Q9ES97 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn3Q9ES97 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.2■□□□□ 0.98
Rtn3Q9ES97 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn3Q9ES97 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Golgb1-201ENSMUST00000023534 498 ntBASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Rtn3Q9ES97 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn3Q9ES97 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn3Q9ES97 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn3Q9ES97 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn3Q9ES97 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms