Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.9■□□□□ 0.78
Tubb3Q9ERD7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tubb3Q9ERD7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Tubb3Q9ERD7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubb3Q9ERD7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubb3Q9ERD7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tubb3Q9ERD7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.89■□□□□ 0.77
Tubb3Q9ERD7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tubb3Q9ERD7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubb3Q9ERD7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubb3Q9ERD7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tubb3Q9ERD7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubb3Q9ERD7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubb3Q9ERD7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubb3Q9ERD7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubb3Q9ERD7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.88■□□□□ 0.77
Tubb3Q9ERD7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubb3Q9ERD7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubb3Q9ERD7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Gm12922-201ENSMUST00000120626 809 ntBASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubb3Q9ERD7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb3Q9ERD7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb3Q9ERD7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Tubb3Q9ERD7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.85■□□□□ 0.77
Tubb3Q9ERD7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb3Q9ERD7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb3Q9ERD7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubb3Q9ERD7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubb3Q9ERD7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb3Q9ERD7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb3Q9ERD7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb3Q9ERD7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb3Q9ERD7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.83■□□□□ 0.77
Tubb3Q9ERD7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.83■□□□□ 0.77
Tubb3Q9ERD7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tubb3Q9ERD7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.83■□□□□ 0.77
Tubb3Q9ERD7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Tubb3Q9ERD7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tubb3Q9ERD7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tubb3Q9ERD7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
Tubb3Q9ERD7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Tubb3Q9ERD7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb3Q9ERD7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb3Q9ERD7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb3Q9ERD7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tubb3Q9ERD7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubb3Q9ERD7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
Tubb3Q9ERD7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.81■□□□□ 0.76
Tubb3Q9ERD7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb3Q9ERD7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb3Q9ERD7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb3Q9ERD7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb3Q9ERD7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Tubb3Q9ERD7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.81■□□□□ 0.76
Tubb3Q9ERD7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb3Q9ERD7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubb3Q9ERD7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tubb3Q9ERD7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Tubb3Q9ERD7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tubb3Q9ERD7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Tubb3Q9ERD7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tubb3Q9ERD7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Tubb3Q9ERD7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tubb3Q9ERD7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb3Q9ERD7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb3Q9ERD7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb3Q9ERD7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.79■□□□□ 0.76
Tubb3Q9ERD7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.79■□□□□ 0.76
Tubb3Q9ERD7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb3Q9ERD7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.79■□□□□ 0.76
Tubb3Q9ERD7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms