Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm7367-201ENSMUST00000057611 492 ntBASIC21.94■■□□□ 1.1
Lysmd1Q9D0E3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lysmd1Q9D0E3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Gm37055-201ENSMUST00000191866 133 ntBASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd1Q9D0E3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.92■■□□□ 1.1
Lysmd1Q9D0E3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Lysmd1Q9D0E3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Lysmd1Q9D0E3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lysmd1Q9D0E3 Gm5643-201ENSMUST00000117081 966 ntBASIC21.91■■□□□ 1.1
Lysmd1Q9D0E3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Lysmd1Q9D0E3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.91■■□□□ 1.1
Lysmd1Q9D0E3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Lysmd1Q9D0E3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lysmd1Q9D0E3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lysmd1Q9D0E3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Lysmd1Q9D0E3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Lysmd1Q9D0E3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.9■■□□□ 1.1
Lysmd1Q9D0E3 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.9■■□□□ 1.1
Lysmd1Q9D0E3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lysmd1Q9D0E3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lysmd1Q9D0E3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Lysmd1Q9D0E3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Lysmd1Q9D0E3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lysmd1Q9D0E3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.89■■□□□ 1.09
Lysmd1Q9D0E3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lysmd1Q9D0E3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lysmd1Q9D0E3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
Lysmd1Q9D0E3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 Gm6420-201ENSMUST00000193885 723 ntBASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd1Q9D0E3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.87■■□□□ 1.09
Lysmd1Q9D0E3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.87■■□□□ 1.09
Lysmd1Q9D0E3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Lysmd1Q9D0E3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lysmd1Q9D0E3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.86■■□□□ 1.09
Lysmd1Q9D0E3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Lysmd1Q9D0E3 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.86■■□□□ 1.09
Lysmd1Q9D0E3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd1Q9D0E3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Lysmd1Q9D0E3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd1Q9D0E3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd1Q9D0E3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lysmd1Q9D0E3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Lysmd1Q9D0E3 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.85■■□□□ 1.09
Lysmd1Q9D0E3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lysmd1Q9D0E3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Lysmd1Q9D0E3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Lysmd1Q9D0E3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd1Q9D0E3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.84■■□□□ 1.09
Lysmd1Q9D0E3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Lysmd1Q9D0E3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lysmd1Q9D0E3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd1Q9D0E3 Gm10231-201ENSMUST00000181584 441 ntBASIC21.83■■□□□ 1.09
Lysmd1Q9D0E3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd1Q9D0E3 Gm10175-202ENSMUST00000208752 441 ntBASIC21.83■■□□□ 1.09
Lysmd1Q9D0E3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd1Q9D0E3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd1Q9D0E3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lysmd1Q9D0E3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lysmd1Q9D0E3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd1Q9D0E3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd1Q9D0E3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd1Q9D0E3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd1Q9D0E3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
Lysmd1Q9D0E3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd1Q9D0E3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lysmd1Q9D0E3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd1Q9D0E3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms