Protein–RNA interactions for Protein: Q9CQX0

Otub2, Ubiquitin thioesterase OTUB2, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub2Q9CQX0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otub2Q9CQX0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otub2Q9CQX0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Gm10493-201ENSMUST00000097270 612 ntBASIC19.43■□□□□ 0.7
Otub2Q9CQX0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub2Q9CQX0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otub2Q9CQX0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otub2Q9CQX0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Otub2Q9CQX0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Otub2Q9CQX0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otub2Q9CQX0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Otub2Q9CQX0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Otub2Q9CQX0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.4■□□□□ 0.7
Otub2Q9CQX0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub2Q9CQX0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Otub2Q9CQX0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub2Q9CQX0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub2Q9CQX0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Otub2Q9CQX0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.4■□□□□ 0.7
Otub2Q9CQX0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.4■□□□□ 0.7
Otub2Q9CQX0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub2Q9CQX0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.4■□□□□ 0.7
Otub2Q9CQX0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Gm40848-201ENSMUST00000221998 324 ntBASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub2Q9CQX0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub2Q9CQX0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub2Q9CQX0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub2Q9CQX0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Otub2Q9CQX0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub2Q9CQX0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub2Q9CQX0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub2Q9CQX0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub2Q9CQX0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub2Q9CQX0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Gm11421-201ENSMUST00000122124 294 ntBASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub2Q9CQX0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otub2Q9CQX0 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.36■□□□□ 0.69
Otub2Q9CQX0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.36■□□□□ 0.69
Otub2Q9CQX0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Otub2Q9CQX0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.36■□□□□ 0.69
Otub2Q9CQX0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Otub2Q9CQX0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Otub2Q9CQX0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otub2Q9CQX0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub2Q9CQX0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub2Q9CQX0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub2Q9CQX0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Otub2Q9CQX0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Otub2Q9CQX0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Otub2Q9CQX0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub2Q9CQX0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub2Q9CQX0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Otub2Q9CQX0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Otub2Q9CQX0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Otub2Q9CQX0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.34■□□□□ 0.69
Otub2Q9CQX0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Otub2Q9CQX0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Otub2Q9CQX0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Otub2Q9CQX0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.33■□□□□ 0.68
Otub2Q9CQX0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Otub2Q9CQX0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms