Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg3Q9CQV4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.14■□□□□ 0.81
Retreg3Q9CQV4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg3Q9CQV4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Retreg3Q9CQV4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Retreg3Q9CQV4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg3Q9CQV4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg3Q9CQV4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Gm27454-201ENSMUST00000185090 204 ntBASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg3Q9CQV4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg3Q9CQV4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg3Q9CQV4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg3Q9CQV4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg3Q9CQV4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg3Q9CQV4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg3Q9CQV4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Retreg3Q9CQV4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retreg3Q9CQV4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Retreg3Q9CQV4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg3Q9CQV4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retreg3Q9CQV4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retreg3Q9CQV4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retreg3Q9CQV4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg3Q9CQV4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg3Q9CQV4 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.1■□□□□ 0.81
Retreg3Q9CQV4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retreg3Q9CQV4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Retreg3Q9CQV4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg3Q9CQV4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg3Q9CQV4 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.09■□□□□ 0.81
Retreg3Q9CQV4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg3Q9CQV4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retreg3Q9CQV4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Mir6236-201ENSMUST00000184437 123 ntBASIC20.08■□□□□ 0.81
Retreg3Q9CQV4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retreg3Q9CQV4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg3Q9CQV4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg3Q9CQV4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Retreg3Q9CQV4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.07■□□□□ 0.8
Retreg3Q9CQV4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg3Q9CQV4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg3Q9CQV4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg3Q9CQV4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retreg3Q9CQV4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retreg3Q9CQV4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.05■□□□□ 0.8
Retreg3Q9CQV4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg3Q9CQV4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Retreg3Q9CQV4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg3Q9CQV4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg3Q9CQV4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retreg3Q9CQV4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms