Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Gm15820-201ENSMUST00000201566 728 ntBASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb1Q9CQ70 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb1Q9CQ70 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1Q9CQ70 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1Q9CQ70 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1Q9CQ70 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
H2afb1Q9CQ70 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1Q9CQ70 Gm5812-201ENSMUST00000061073 957 ntBASIC16.35■□□□□ 0.21
H2afb1Q9CQ70 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1Q9CQ70 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1Q9CQ70 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb1Q9CQ70 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Gm7417-201ENSMUST00000192950 473 ntBASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Gm9870-201ENSMUST00000063874 645 ntBASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb1Q9CQ70 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.33■□□□□ 0.21
H2afb1Q9CQ70 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb1Q9CQ70 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
H2afb1Q9CQ70 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1Q9CQ70 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1Q9CQ70 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Mir6236-201ENSMUST00000184437 123 ntBASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Gm43530-201ENSMUST00000195920 274 ntBASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
H2afb1Q9CQ70 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms