Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rQ99PI8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rQ99PI8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rQ99PI8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.64■□□□□ 0.41
Rtn4rQ99PI8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rQ99PI8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rtn4rQ99PI8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rQ99PI8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rQ99PI8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rtn4rQ99PI8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rQ99PI8 Iqck-206ENSMUST00000208658 2891 ntBASIC17.63■□□□□ 0.41
Rtn4rQ99PI8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rQ99PI8 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.63■□□□□ 0.41
Rtn4rQ99PI8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rQ99PI8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rQ99PI8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rQ99PI8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rQ99PI8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn4rQ99PI8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn4rQ99PI8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Gm12821-201ENSMUST00000120022 600 ntBASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn4rQ99PI8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Gm43137-201ENSMUST00000198052 594 ntBASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Gm45417-201ENSMUST00000209533 758 ntBASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn4rQ99PI8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn4rQ99PI8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn4rQ99PI8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.58■□□□□ 0.41
Rtn4rQ99PI8 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.58■□□□□ 0.4
Rtn4rQ99PI8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rtn4rQ99PI8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Rtn4rQ99PI8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn4rQ99PI8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn4rQ99PI8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn4rQ99PI8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4rQ99PI8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms