Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf111Q99ML9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf111Q99ML9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.39■□□□□ 0.7
Rnf111Q99ML9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
Rnf111Q99ML9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.39■□□□□ 0.69
Rnf111Q99ML9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf111Q99ML9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf111Q99ML9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf111Q99ML9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf111Q99ML9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf111Q99ML9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rnf111Q99ML9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rnf111Q99ML9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf111Q99ML9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rnf111Q99ML9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rnf111Q99ML9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf111Q99ML9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.36■□□□□ 0.69
Rnf111Q99ML9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.36■□□□□ 0.69
Rnf111Q99ML9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf111Q99ML9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf111Q99ML9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Rnf111Q99ML9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.35■□□□□ 0.69
Rnf111Q99ML9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf111Q99ML9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf111Q99ML9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf111Q99ML9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.34■□□□□ 0.69
Rnf111Q99ML9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf111Q99ML9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf111Q99ML9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf111Q99ML9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf111Q99ML9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf111Q99ML9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf111Q99ML9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf111Q99ML9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.33■□□□□ 0.68
Rnf111Q99ML9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Etf1-202ENSMUST00000180351 108 ntBASIC19.32■□□□□ 0.68
Rnf111Q99ML9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rnf111Q99ML9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf111Q99ML9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf111Q99ML9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms